| Fold induction (p values) | Page 1 | |||||||||||||||||||||||||||||||
| ORF | Gene or homologue | UT500/UT501 | UT500/UT502 | UT500/UT503 | ||||||||||||||||||||||||||||
| ORF00097 | ketol-acid reductoisomerase | -8.1 | ( | 0.01 | ) | -1.6 | ( | 0.55 | ) | -7.7 | ( | 0.02 | ) | |||||||||||||||||||
| ORF00099 | acetolactate synthase, large subunit | -2.8 | ( | 0.06 | ) | -1.6 | ( | 0.34 | ) | -4.9 | ( | 0.04 | ) | |||||||||||||||||||
| ORF00198 | polyhydroxyalkanoic acid synthase | -2.5 | ( | 0.02 | ) | -1.8 | ( | 0.02 | ) | -2.1 | ( | 0.03 | ) | |||||||||||||||||||
| ORF00243 | immune inhibitor A metalloprotease | -2.9 | ( | 0.06 | ) | -1.5 | ( | 0.15 | ) | -4.6 | ( | 0.00 | ) | |||||||||||||||||||
| ORF00364 | peptide ABC transporter, ATP-binding protein | -1.6 | ( | 0.12 | ) | -1.2 | ( | 0.26 | ) | -2.0 | ( | 0.00 | ) | |||||||||||||||||||
| ORF00367 | oligopeptide ABC transporter, permease protein | -1.7 | ( | 0.14 | ) | -1.3 | ( | 0.12 | ) | -2.1 | ( | 0.00 | ) | |||||||||||||||||||
| ORF00529 | unknown | -1.3 | ( | 0.22 | ) | -2.0 | ( | 0.04 | ) | NA | ||||||||||||||||||||||
| ORF00930 | quinol oxidase, subunit II | -1.9 | ( | 0.07 | ) | -1.0 | ( | 0.97 | ) | -1.9 | ( | 0.02 | ) | |||||||||||||||||||
| ORF00931 | quinol oxidase, subunit I | -1.8 | ( | 0.15 | ) | 1.1 | ( | 0.55 | ) | -1.8 | ( | 0.01 | ) | |||||||||||||||||||
| ORF00932 | Cytochrome c oxidase subunit III | -1.6 | ( | 0.20 | ) | 1.1 | ( | 0.69 | ) | -2.1 | ( | 0.00 | ) | |||||||||||||||||||
| ORF00981 | peptide ABC transporter, ATP-binding protein | -4.9 | ( | 0.11 | ) | -1.8 | ( | 0.08 | ) | -4.1 | ( | 0.15 | ) | |||||||||||||||||||
| ORF00982 | peptide ABC transporter, ATP-binding protein | -3.0 | ( | 0.01 | ) | -1.3 | ( | 0.13 | ) | -2.6 | ( | 0.01 | ) | |||||||||||||||||||
| ORF00983 | peptide ABC transporter, permease protein | -3.5 | ( | 0.02 | ) | -1.3 | ( | 0.20 | ) | -3.5 | ( | 0.02 | ) | |||||||||||||||||||
| ORF00984 | peptide ABC transporter, permease protein | -3.4 | ( | 0.04 | ) | -1.3 | ( | 0.36 | ) | -3.4 | ( | 0.02 | ) | |||||||||||||||||||
| ORF00985 | peptide ABC transporter, peptide-binding protein | -4.0 | ( | 0.01 | ) | -1.4 | ( | 0.25 | ) | -3.6 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01004 | sodium/alanine symporter family protein | -2.5 | ( | 0.14 | ) | 1.3 | ( | 0.47 | ) | -4.8 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01252 | fumarate hydratase, class I, putative | -1.9 | ( | 0.01 | ) | -1.2 | ( | 0.26 | ) | -2.0 | ( | 0.03 | ) | |||||||||||||||||||
| ORF01274 | phosphotyrosine protein phosphatase | -2.0 | ( | 0.02 | ) | -1.3 | ( | 0.05 | ) | -1.2 | ( | 0.18 | ) | |||||||||||||||||||
| ORF01364 | polysaccharide deacetylase-like protein | NA | NA | 5.6 | ( | 0.01 | ) | |||||||||||||||||||||||||
| ORF01543 | lipoprotein, putative | NA | -1.3 | ( | 0.45 | ) | -5.1 | ( | 0.02 | ) | ||||||||||||||||||||||
| ORF01563 | glucosamine--fructose-6-P aminotransferase | 2.9 | ( | 0.06 | ) | -1.5 | ( | 0.47 | ) | 3.6 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01563 | glucosamine--fructose-6-P aminotransferase | NA | -1.6 | ( | 0.50 | ) | 4.6 | ( | 0.00 | ) | ||||||||||||||||||||||
| ORF01568 | arginase | -2.0 | ( | 0.04 | ) | -1.8 | ( | 0.05 | ) | -2.6 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01581 | tRNA pseudouridine synthase A | -3.6 | ( | 0.12 | ) | -1.6 | ( | 0.58 | ) | -2.6 | ( | 0.03 | ) | |||||||||||||||||||
| ORF01582 | cobalt transport protein | -1.5 | ( | 0.20 | ) | -1.2 | ( | 0.64 | ) | -2.0 | ( | 0.03 | ) | |||||||||||||||||||
| ORF01680 | ribose-phosphate pyrophosphokinase | 1.8 | ( | 0.04 | ) | -1.4 | ( | 0.17 | ) | 2.4 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01681 | UDP-N-acetylglucosamine pyrophosphorylase | 1.9 | ( | 0.12 | ) | -1.3 | ( | 0.11 | ) | 2.4 | ( | 0.01 | ) | |||||||||||||||||||
| ORF01681 | UDP-N-acetylglucosamine pyrophosphorylase | 1.7 | ( | 0.13 | ) | -1.3 | ( | 0.06 | ) | 2.4 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01681 | UDP-N-acetylglucosamine pyrophosphorylase | 1.6 | ( | 0.27 | ) | -1.5 | ( | 0.10 | ) | 2.4 | ( | 0.02 | ) | |||||||||||||||||||
| ORF01720 | SNO glutamine amidotransferase | -1.8 | ( | 0.20 | ) | -1.2 | ( | 0.10 | ) | -2.0 | ( | 0.07 | ) | |||||||||||||||||||
| ORF01721 | pyridoxine biosynthesis protein | -1.8 | ( | 0.13 | ) | -1.3 | ( | 0.13 | ) | -2.1 | ( | 0.03 | ) | |||||||||||||||||||
| ORF01855 | conserved hypothetical protein | -1.9 | ( | 0.01 | ) | -1.6 | ( | 0.01 | ) | -1.7 | ( | 0.00 | ) | |||||||||||||||||||
| ORF01898 | LPXTG-motif cell wall anchor domain protein | -2.2 | ( | 0.07 | ) | -1.4 | ( | 0.38 | ) | -2.3 | ( | 0.05 | ) | |||||||||||||||||||
| ORF01900 | Non available | -2.2 | ( | 0.03 | ) | -1.1 | ( | 0.55 | ) | -2.4 | ( | 0.04 | ) | |||||||||||||||||||
| ORF02038 | conserved domain protein | NA | -1.1 | ( | 0.79 | ) | -2.0 | ( | 0.02 | ) | ||||||||||||||||||||||
| ORF02063 | arsenical pump membrane protein, putative | -5.0 | ( | 0.04 | ) | -1.6 | ( | 0.22 | ) | -3.0 | ( | 0.09 | ) | |||||||||||||||||||
| ORF02252 | sodium/alanine symporter | -2.3 | ( | 0.16 | ) | -1.3 | ( | 0.17 | ) | -4.7 | ( | 0.05 | ) | |||||||||||||||||||
| ORF02258 | ferritin | -1.9 | ( | 0.04 | ) | -1.4 | ( | 0.11 | ) | -1.7 | ( | 0.04 | ) | |||||||||||||||||||
| ORF02276 | methyl-accepting chemotaxis protein, putative | NA | NA | -8.9 | ( | 0.01 | ) | |||||||||||||||||||||||||
| ORF02449 | phosphoglucose isomerase | -2.0 | ( | 0.02 | ) | -1.4 | ( | 0.11 | ) | -1.8 | ( | 0.01 | ) | |||||||||||||||||||
| Fold induction (p values) | Page 2 | |||||||||||||||||||||||||||||||
| ORF | Gene or homologue | UT500/UT501 | UT500/UT502 | UT500/UT503 | ||||||||||||||||||||||||||||
| ORF02460 | glycogen biosynthesis protein GlgD | -2.0 | ( | 0.05 | ) | -1.2 | ( | 0.53 | ) | -1.7 | ( | 0.01 | ) | |||||||||||||||||||
| ORF02476 | O-succinylbenzoic acid--CoA ligase, putative | -2.5 | ( | 0.02 | ) | -1.0 | ( | 0.88 | ) | -1.4 | ( | 0.57 | ) | |||||||||||||||||||
| ORF02527 | ferrous iron transport protein B | NA | NA | 7.4 | ( | 0.00 | ) | |||||||||||||||||||||||||
| ORF02700 | acetoin utilization protein AcuC | -2.4 | ( | 0.00 | ) | -1.3 | ( | 0.24 | ) | -2.2 | ( | 0.00 | ) | |||||||||||||||||||
| ORF02701 | acetoin utilization protein AcuB | -2.0 | ( | 0.06 | ) | -1.2 | ( | 0.49 | ) | -2.4 | ( | 0.02 | ) | |||||||||||||||||||
| ORF02702 | acetoin utilization protein AcuA | -1.8 | ( | 0.01 | ) | -1.3 | ( | 0.05 | ) | -1.8 | ( | 0.01 | ) | |||||||||||||||||||
| ORF02887 | succinate dehydrogenase, flavoprotein subunit | -1.7 | ( | 0.18 | ) | -1.2 | ( | 0.10 | ) | -1.9 | ( | 0.02 | ) | |||||||||||||||||||
| ORF02888 | succinate dehydrogenase, iron-sulfur protein | -1.4 | ( | 0.42 | ) | -1.2 | ( | 0.25 | ) | -2.2 | ( | 0.01 | ) | |||||||||||||||||||
| ORF02888 | succinate dehydrogenase, iron-sulfur protein | -1.7 | ( | 0.19 | ) | -1.2 | ( | 0.19 | ) | -2.0 | ( | 0.02 | ) | |||||||||||||||||||
| ORF02938 | conserved hypothetical protein | -2.5 | ( | 0.01 | ) | -1.3 | ( | 0.40 | ) | -2.3 | ( | 0.06 | ) | |||||||||||||||||||
| ORF03022 | protein-export membrane protein SecDF | 2.3 | ( | 0.02 | ) | -1.2 | ( | 0.61 | ) | 3.1 | ( | 0.02 | ) | |||||||||||||||||||
| ORF03149 | HDIG domain protein | -1.4 | ( | 0.40 | ) | -1.5 | ( | 0.02 | ) | 2.1 | ( | 0.05 | ) | |||||||||||||||||||
| ORF03199 | transcriptional regulator, ArsR family | -2.1 | ( | 0.10 | ) | -1.0 | ( | 0.92 | ) | -2.0 | ( | 0.01 | ) | |||||||||||||||||||
| ORF03237 | glycine cleavage system P protein, subunit 2 | -1.7 | ( | 0.18 | ) | -1.1 | ( | 0.53 | ) | -2.0 | ( | 0.01 | ) | |||||||||||||||||||
| ORF03378 | riboflavin biosynthesis protein RibD | -2.1 | ( | 0.01 | ) | 1.2 | ( | 0.02 | ) | -1.8 | ( | 0.02 | ) | |||||||||||||||||||
| ORF03384 | sugar-binding transcriptional regulator | -2.2 | ( | 0.12 | ) | -1.0 | ( | 0.97 | ) | -2.3 | ( | 0.05 | ) | |||||||||||||||||||
| ORF03396 | ribosomal-protein-serine acetyltransferase | -2.3 | ( | 0.04 | ) | -1.3 | ( | 0.09 | ) | -1.5 | ( | 0.31 | ) | |||||||||||||||||||
| ORF03710 | division initiation protein | NA | NA | 3.2 | ( | 0.05 | ) | |||||||||||||||||||||||||
| ORF03761 | methionyl-tRNA formyltransferase | 1.1 | ( | 0.19 | ) | 1.0 | ( | 0.81 | ) | 2.2 | ( | 0.04 | ) | |||||||||||||||||||
| ORF03798 | succinyl-CoA synthase, beta subunit | -1.9 | ( | 0.21 | ) | -1.3 | ( | 0.03 | ) | -2.0 | ( | 0.01 | ) | |||||||||||||||||||
| ORF03799 | succinyl-CoA synthase, alpha subunit | -1.7 | ( | 0.22 | ) | -1.3 | ( | 0.18 | ) | -1.9 | ( | 0.03 | ) | |||||||||||||||||||
| ORF03845 | transcriptional regulator | 1.4 | ( | 0.19 | ) | -1.0 | ( | 0.91 | ) | 2.2 | ( | 0.03 | ) | |||||||||||||||||||
| ORF03848 | sugar ABC transporter, ATP-binding protein | NA | 1.3 | ( | 0.20 | ) | 2.7 | ( | 0.09 | ) | ||||||||||||||||||||||
| ORF03851 | sugar ABC transporter, permease protein | NA | 1.5 | ( | 0.03 | ) | 2.9 | ( | 0.06 | ) | ||||||||||||||||||||||
| ORF03852 | sugar ABC transporter, permease protein | 1.7 | ( | 0.24 | ) | 1.3 | ( | 0.09 | ) | 2.9 | ( | 0.02 | ) | |||||||||||||||||||
| ORF04144 | aconitate hydratase 1 | -2.6 | ( | 0.11 | ) | -1.3 | ( | 0.19 | ) | -2.5 | ( | 0.02 | ) | |||||||||||||||||||
| ORF04169 | oxidoreductase, Gfo/Idh/MocA family | NA | NA | -2.5 | ( | 0.07 | ) | |||||||||||||||||||||||||
| ORF04183 | TraC protein | -1.9 | ( | 0.06 | ) | -1.3 | ( | 0.13 | ) | -1.7 | ( | 0.02 | ) | |||||||||||||||||||
| ORF04736 | glutaminase A | 1.1 | ( | 0.42 | ) | 1.5 | ( | 0.39 | ) | 2.1 | ( | 0.04 | ) | |||||||||||||||||||
| ORF04785 | membrane protein, putative | -4.0 | ( | 0.00 | ) | -3.9 | ( | 0.00 | ) | -4.9 | ( | 0.17 | ) | |||||||||||||||||||
| ORF04789 | membrane protein, putative | -2.4 | ( | 0.05 | ) | -1.6 | ( | 0.44 | ) | -3.1 | ( | 0.01 | ) | |||||||||||||||||||
| ORF04962 | chorismate mutase | -2.5 | ( | 0.01 | ) | -1.3 | ( | 0.02 | ) | -1.6 | ( | 0.01 | ) | |||||||||||||||||||
| ORF04964 | chorismate synthase | -3.5 | ( | 0.05 | ) | -1.4 | ( | 0.08 | ) | -2.6 | ( | 0.04 | ) | |||||||||||||||||||
| ORF04965 | histidinol-phosphate aminotransferase | -3.9 | ( | 0.01 | ) | -1.3 | ( | 0.31 | ) | NA | ||||||||||||||||||||||
| ORF04966 | prephenate dehydrogenase | -3.2 | ( | 0.05 | ) | -1.5 | ( | 0.19 | ) | -4.4 | ( | 0.03 | ) | |||||||||||||||||||
| ORF04967 | 3-phosphoshikimate 1-carboxyvinyltransferase | -3.0 | ( | 0.04 | ) | -1.3 | ( | 0.25 | ) | -4.2 | ( | 0.02 | ) | |||||||||||||||||||
| ORF05485 | Non available | NA | 1.3 | ( | 0.23 | ) | 2.7 | ( | 0.01 | ) | ||||||||||||||||||||||
| ORF05712 | conserved hypothetical protein | NA | -2.4 | ( | 0.05 | ) | NA | |||||||||||||||||||||||||
| ORF05745 | permease, putative | -2.0 | ( | 0.04 | ) | -1.3 | ( | 0.09 | ) | -1.9 | ( | 0.04 | ) | |||||||||||||||||||
| ORF05746 | azoreductase, putative | NA | -2.0 | ( | 0.01 | ) | NA | |||||||||||||||||||||||||
| ORF05839 | TPR domain protein | -1.4 | ( | 0.40 | ) | -1.8 | ( | 0.03 | ) | 2.8 | ( | 0.01 | ) | |||||||||||||||||||
| Fold induction (p values) | Page 3 | |||||||||||||||||||||||||||||||
| ORF | Gene or homologue | UT500/UT501 | UT500/UT502 | UT500/UT503 | ||||||||||||||||||||||||||||
| ORF05917 | respiratory nitrate reductase, beta subunit | NA | -2.5 | ( | 0.03 | ) | -4.2 | ( | 0.16 | ) | ||||||||||||||||||||||
| ORF05974 | Membrane protease subunit | -1.9 | ( | 0.03 | ) | -1.0 | ( | 0.82 | ) | -1.8 | ( | 0.04 | ) | |||||||||||||||||||
| ORF05990 | CBS domain protein | -2.6 | ( | 0.07 | ) | -1.3 | ( | 0.05 | ) | -2.8 | ( | 0.05 | ) | |||||||||||||||||||
| ORF06016 | TraC protein | -3.5 | ( | 0.02 | ) | -1.2 | ( | 0.45 | ) | -3.4 | ( | 0.01 | ) | |||||||||||||||||||
| ORF06279 | carbon starvation protein A, putative | -3.9 | ( | 0.04 | ) | 1.2 | ( | 0.51 | ) | -6.0 | ( | 0.01 | ) | |||||||||||||||||||
| pXO1-13 | TM + DNA binding domain | -2.7 | ( | 0.01 | ) | NA | NA | |||||||||||||||||||||||||
| pXO1-90 | SLH domain | 60.8 | ( | 0.00 | ) | 1.3 | ( | 0.27 | ) | 238.5 | ( | 0.01 | ) | |||||||||||||||||||
| pXO1-91 | Acid phosphatase | 24.8 | ( | 0.00 | ) | -1.1 | ( | 0.66 | ) | 84.7 | ( | 0.02 | ) | |||||||||||||||||||
| pXO1-107 | Lethal factor | 10.9 | ( | 0.02 | ) | 1.1 | ( | 0.72 | ) | 16.3 | ( | 0.03 | ) | |||||||||||||||||||
| pXO1-110 | Protective antigen | 51.9 | ( | 0.00 | ) | NA | 32.9 | ( | 0.01 | ) | ||||||||||||||||||||||
| pXO1-114 | 2.1 | ( | 0.24 | ) | 3.1 | ( | 0.02 | ) | NA | |||||||||||||||||||||||
| pXO1-122 | Edema factor | 2.7 | ( | 0.05 | ) | -1.1 | ( | 0.81 | ) | 3.4 | ( | 0.03 | ) | |||||||||||||||||||
| pXO1-126 | Unknown | 6.8 | ( | 0.02 | ) | 1.0 | ( | 0.99 | ) | 14.4 | ( | 0.04 | ) | |||||||||||||||||||
| pXO2-42 | Amidase | 4.6 | ( | 0.03 | ) | 15.7 | ( | 0.00 | ) | 41.4 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-49 | Transposase | 8.6 | ( | 0.00 | ) | -1.3 | ( | 0.06 | ) | 32.4 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-50 | Transposase | 8.1 | ( | 0.01 | ) | -1.2 | ( | 0.36 | ) | 32.0 | ( | 0.01 | ) | |||||||||||||||||||
| pXO2-53 | AcpA like | 9.3 | ( | 0.02 | ) | 1.4 | ( | 0.60 | ) | 74.1 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-55 | capD | 8.1 | ( | 0.05 | ) | 1.6 | ( | 0.48 | ) | 79.7 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-56 | capA | 7.5 | ( | 0.03 | ) | NA | 82.2 | ( | 0.02 | ) | ||||||||||||||||||||||
| pXO2-57 | capC | 8.3 | ( | 0.02 | ) | 1.9 | ( | 0.07 | ) | 345.5 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-58 | capB | 9.1 | ( | 0.02 | ) | 1.7 | ( | 0.25 | ) | 118.3 | ( | 0.00 | ) | |||||||||||||||||||
| pXO2-60 | Unknown | 40.6 | ( | 0.00 | ) | NA | 59.3 | ( | 0.01 | ) | ||||||||||||||||||||||
| pXO2-61 | Unknown | 54.0 | ( | 0.00 | ) | 1.0 | ( | 0.91 | ) | 90.9 | ( | 0.01 | ) | |||||||||||||||||||
| pXO2-64 | acpA | 11.6 | ( | 0.01 | ) | - | - | |||||||||||||||||||||||||
| Legend: | ||||||||||||||||||||||||||||||||
| Bold numbers indicate p<0.05 and fold-induction >2 | ||||||||||||||||||||||||||||||||
| Brackets indicate ORFs predicted to comprise operons. | ||||||||||||||||||||||||||||||||
| NA = Data Non Available | ||||||||||||||||||||||||||||||||